STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_15505Histone-lysine N-methyltransferase Su(Var)3-9. (118 aa)    
Predicted Functional Partners:
Avbf_03245
Chromodomain Y-like protein.
    
 0.987
Avbf_07432
Chromobox protein-like 3.
   
 0.986
Avbf_05236
Polycomb protein eed-B.
    
 0.944
Avbf_01840
Uncharacterized protein.
    
 0.944
Avbf_02853
PHD finger protein 20-like protein 1.
   
 0.932
Avbf_08268
Retinoblastoma-binding protein 5-like protein.
    
 0.932
Avbf_14592
Polycomb protein suz12.
    
 0.928
Avbf_07891
Polycomb protein suz12.
    
 0.928
Avbf_05957
Putative histone-binding protein Caf1.
    
 0.910
Avbf_02874
WD repeat-containing protein 73.
    
 0.910
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.