STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_07325Deoxyribodipyrimidine photo-lyase. (319 aa)    
Predicted Functional Partners:
Avbf_01768
Period circadian protein.
   
 0.980
Avbf_01094
Protein timeless.
    
 0.947
Avbf_03852
Protein timeless-like protein.
    
 0.947
Avbf_15477
Casein kinase I isoform epsilon.
    
 0.913
Avbf_06748
Uncharacterized protein.
    
 0.913
Avbf_08511
Serine/threonine-protein kinase VRK1.
    
 0.913
Avbf_06151
JmjC domain-containing protein.
    
 0.913
Avbf_10949
Uncharacterized protein.
    
 0.913
Avbf_11568
Neuronal PAS domain-containing protein 2.
    
 0.907
Avbf_01008
Aryl hydrocarbon receptor nuclear translocator-like protein.
    
 0.907
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.