STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_08655Biogenesis of lysosome-related organelles complex 1 subunit 2. (168 aa)    
Predicted Functional Partners:
Avbf_08341
Biogenesis of lysosome-related organelles complex 1 subunit 1.
   
 
 0.972
Avbf_18508
SNARE-associated protein Snapin.
   
 
 0.914
Avbf_18507
Uncharacterized protein.
   
 
 0.914
Avbf_08958
SNARE-associated protein Snapin.
   
 
 0.914
Avbf_00949
UPF0693 protein C10orf32-like protein.
    
 
 0.870
Avbf_18893
Uncharacterized protein.
    
 
 0.847
Avbf_10378
Sorting nexin-2.
    
 
 0.839
Avbf_03987
N-acylneuraminate cytidylyltransferase.
    
 
 0.839
Avbf_03623
Protein MEF2BNB-like protein.
   
 
 0.689
Avbf_03773
KxDL motif-containing protein.
    
 
 0.589
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.