STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_08332Lethal(2) giant larvae protein-like 2. (920 aa)    
Predicted Functional Partners:
Avbf_15756
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.996
Avbf_16226
Partitioning defective protein 6.
    
 
 0.982
Avbf_08793
Syntaxin-1A; Belongs to the syntaxin family.
    
 0.972
Avbf_02373
Disks large 1 tumor suppressor protein; Belongs to the MAGUK family.
   
 0.949
Avbf_02372
Protein lap4.
   
 0.949
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.902
Avbf_05005
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.902
Avbf_02134
Synaptosomal-associated protein 29.
    
 
 0.876
Avbf_04611
Myb_DNA-bind_5 domain-containing protein.
    
 
 0.876
Avbf_06725
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 
 0.876
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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