Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_00509 | Avbf_00835 | A0A444TSG8 | A0A444TIP5 | Uncharacterized protein. | Uncharacterized protein. | 0.637 |
Avbf_00509 | Avbf_08532 | A0A444TSG8 | A0A444SUF7 | Uncharacterized protein. | Serine/threonine-protein kinase PLK4. | 0.956 |
Avbf_00509 | Avbf_15671 | A0A444TSG8 | A0A444SDZ6 | Uncharacterized protein. | Cyclin-dependent kinase 11B. | 0.670 |
Avbf_00835 | Avbf_00509 | A0A444TIP5 | A0A444TSG8 | Uncharacterized protein. | Uncharacterized protein. | 0.637 |
Avbf_00835 | Avbf_00953 | A0A444TIP5 | A0A444TU25 | Uncharacterized protein. | Casein kinase II subunit alpha. | 0.493 |
Avbf_00835 | Avbf_01898 | A0A444TIP5 | A0A444TG54 | Uncharacterized protein. | Cyclin-dependent kinase 16. | 0.800 |
Avbf_00835 | Avbf_01971 | A0A444TIP5 | A0A444SD93 | Uncharacterized protein. | Tonsoku-like protein. | 0.599 |
Avbf_00835 | Avbf_02181 | A0A444TIP5 | A0A444TLE0 | Uncharacterized protein. | Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. | 0.805 |
Avbf_00835 | Avbf_03662 | A0A444TIP5 | A0A444TN75 | Uncharacterized protein. | Cyclin-dependent kinase 2. | 0.805 |
Avbf_00835 | Avbf_06868 | A0A444TIP5 | A0A444SE27 | Uncharacterized protein. | Serine/threonine-protein kinase Nek2. | 0.447 |
Avbf_00835 | Avbf_08532 | A0A444TIP5 | A0A444SUF7 | Uncharacterized protein. | Serine/threonine-protein kinase PLK4. | 0.693 |
Avbf_00835 | Avbf_15477 | A0A444TIP5 | A0A444T202 | Uncharacterized protein. | Casein kinase I isoform epsilon. | 0.518 |
Avbf_00835 | Avbf_15671 | A0A444TIP5 | A0A444SDZ6 | Uncharacterized protein. | Cyclin-dependent kinase 11B. | 0.648 |
Avbf_00953 | Avbf_00835 | A0A444TU25 | A0A444TIP5 | Casein kinase II subunit alpha. | Uncharacterized protein. | 0.493 |
Avbf_00953 | Avbf_01971 | A0A444TU25 | A0A444SD93 | Casein kinase II subunit alpha. | Tonsoku-like protein. | 0.599 |
Avbf_00953 | Avbf_15477 | A0A444TU25 | A0A444T202 | Casein kinase II subunit alpha. | Casein kinase I isoform epsilon. | 0.516 |
Avbf_00953 | Avbf_15671 | A0A444TU25 | A0A444SDZ6 | Casein kinase II subunit alpha. | Cyclin-dependent kinase 11B. | 0.659 |
Avbf_01898 | Avbf_00835 | A0A444TG54 | A0A444TIP5 | Cyclin-dependent kinase 16. | Uncharacterized protein. | 0.800 |
Avbf_01898 | Avbf_01971 | A0A444TG54 | A0A444SD93 | Cyclin-dependent kinase 16. | Tonsoku-like protein. | 0.898 |
Avbf_01898 | Avbf_06868 | A0A444TG54 | A0A444SE27 | Cyclin-dependent kinase 16. | Serine/threonine-protein kinase Nek2. | 0.531 |
page 1 of 4