STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_10344Vesicle transport protein USE1. (243 aa)    
Predicted Functional Partners:
Avbf_10998
Syntaxin-18.
   
 0.997
Avbf_02769
GPI mannosyltransferase 4; Belongs to the synaptobrevin family.
    
 0.996
Avbf_03154
Ribosomal protein S6 kinase delta-1.
    
 0.994
Avbf_05243
Centromere/kinetochore protein zw10-like protein.
    
 0.986
Avbf_05879
Centromere/kinetochore protein zw10-like protein.
    
 0.986
Avbf_14470
Neuroblastoma-amplified sequence.
    
 0.984
Avbf_08063
Neuroblastoma-amplified sequence.
    
 0.984
Avbf_08064
Uncharacterized protein.
    
 0.984
Avbf_02548
Alpha-soluble NSF attachment protein.
    
 0.979
Avbf_14271
Non-specific serine/threonine protein kinase.
    
 0.967
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.