STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_02038Uncharacterized protein. (291 aa)    
Predicted Functional Partners:
Avbf_01845
CAVP-target protein.
    
 0.925
Avbf_10986
HAUS augmin-like complex subunit 3.
    
 0.891
Avbf_02319
Guanine nucleotide-binding protein G(S) subunit alpha.
    
 0.887
Avbf_04505
Guanine nucleotide-binding protein G(Q) subunit alpha.
    
 0.881
Avbf_12921
HAUS augmin-like complex subunit 1.
    
 0.862
Avbf_10011
RNA-binding protein 42.
    
  0.817
Avbf_14993
ERI1 exoribonuclease 3.
    
  0.808
Avbf_10515
WD_REPEATS_REGION domain-containing protein.
    
  0.808
Avbf_04590
Guanine nucleotide-binding protein subunit beta-2.
    
  0.808
Avbf_11326
Kalirin.
    
 0.764
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.