STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_11203ATP-binding cassette sub-family D member 4. (273 aa)    
Predicted Functional Partners:
Avbf_08151
ATP-binding cassette sub-family D member 2.
  
0.984
Avbf_02215
Peroxisomal biogenesis factor 19.
    
 0.963
Avbf_07602
ATP-binding cassette sub-family D member 3.
  
  
0.910
Avbf_16193
DNA repair protein RAD51-like protein 2.
    
 
 0.885
Avbf_18828
DNA repair protein RAD51-like protein 4.
    
 
 0.885
Avbf_15774
DNA repair protein RAD51-like protein 4.
    
 
 0.885
Avbf_12560
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.828
Avbf_09381
Peroxisomal membrane protein PEX16.
     
 0.805
Avbf_02384
Stomatin-like protein 1.
  
 0.803
Avbf_05152
U6 snRNA-associated Sm-like protein LSm6; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 
 0.802
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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