STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_12738Putative isomerase. (260 aa)    
Predicted Functional Partners:
Avbf_18881
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.762
Avbf_08540
Orn_DAP_Arg_deC domain-containing protein.
    
  0.762
Avbf_08541
Ornithine decarboxylase.
    
  0.762
Avbf_08570
Diaminopimelate decarboxylase.
    
  0.762
Avbf_01442
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.762
Avbf_13689
Septin-4.
    
  0.755
Avbf_16885
Cytosolic non-specific dipeptidase.
    
  0.755
Avbf_05606
Putative carboxypeptidase PM20D1.
    
  0.755
Avbf_12139
CXXC-type zinc finger protein 1.
    
   0.685
Avbf_18559
WD repeat-containing protein 82.
    
   0.441
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.