STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_10384Uncharacterized protein. (139 aa)    
Predicted Functional Partners:
Avbf_01845
CAVP-target protein.
   
 0.937
Avbf_09978
Exocyst complex component 8.
    
   0.768
Avbf_04928
Intersectin-2.
    
 0.762
Avbf_13921
AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 0.732
Avbf_06543
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.732
Avbf_07259
Uncharacterized protein.
    
 0.731
Avbf_00509
Uncharacterized protein.
    
 0.731
Avbf_08881
Clathrin heavy chain 1.
   
 
 0.720
Avbf_11326
Kalirin.
    
 0.716
Avbf_03568
Contactin-5.
    
 0.716
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.