STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_056134-hydroxyphenylpyruvate dioxygenase. (382 aa)    
Predicted Functional Partners:
Avbf_04984
Aspartate aminotransferase.
  
 
 0.959
Avbf_14365
Uncharacterized protein.
  
 
 0.943
Avbf_08021
Propionyl-CoA carboxylase beta chain, mitochondrial.
  
 
 0.943
Avbf_00097
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
  
 
 0.943
Avbf_15519
Aminotran_1_2 domain-containing protein.
  
 
 0.941
Avbf_15520
Aspartate aminotransferase.
  
 
 0.941
Avbf_07740
Aspartate aminotransferase.
  
 
 0.941
Avbf_05441
Negative elongation factor D.
  
 
 0.940
Avbf_12593
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
  
 
 0.940
Avbf_16986
Uncharacterized protein.
     
 0.913
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.