STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_10947Selenocysteine-specific elongation factor. (554 aa)    
Predicted Functional Partners:
Avbf_16262
Eukaryotic translation initiation factor 2 subunit 2.
   
 0.996
Avbf_10392
Eukaryotic translation initiation factor 2 subunit 1.
   
 0.995
Avbf_13160
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.995
Avbf_04015
Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.
   
 0.995
Avbf_10251
40S ribosomal protein S6.
  
 0.995
Avbf_06551
Eukaryotic translation initiation factor 3 subunit B.
   
 0.995
Avbf_07264
40S ribosomal protein S3.
   
 0.995
Avbf_08285
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.994
Avbf_01811
Eukaryotic translation initiation factor 3 subunit E; Belongs to the eIF-3 subunit E family.
   
 0.993
Avbf_05703
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.993
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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