STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_09921Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (837 aa)    
Predicted Functional Partners:
Avbf_06447
Uncharacterized protein.
   
 0.999
Avbf_06536
Uncharacterized protein.
   
 0.999
Avbf_00986
Nucleoporin seh1; Belongs to the WD repeat SEC13 family.
   
 0.999
Avbf_03519
Nuclear pore complex protein.
   
 0.999
Avbf_10363
Nucleoporin Nup43.
   
 0.999
Avbf_10145
Nuclear pore complex protein.
   
 0.998
Avbf_00919
Nuclear pore protein.
   
 0.998
Avbf_07768
Nuclear pore complex protein.
   
 0.997
Avbf_02896
Nuclear pore complex protein Nup54.
   
 0.997
Avbf_05858
Nuclear pore glycoprotein p62.
   
 0.996
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.