STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_13807Acetylcholinesterase. (236 aa)    
Predicted Functional Partners:
Avbf_05537
Uncharacterized protein.
   
 0.806
Avbf_05536
Neurexin-1.
   
 0.806
Avbf_05535
Neurexin-2.
   
 0.806
Avbf_17896
Peripheral plasma membrane protein CASK.
    
  0.687
Avbf_03924
Peripheral plasma membrane protein CASK.
    
  0.687
Avbf_14054
Uncharacterized protein.
   
  0.669
Avbf_10375
Glycerophosphocholine phosphodiesterase GPCPD1.
    
 0.650
Avbf_10227
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.646
Avbf_11392
Ribosomal RNA small subunit methyltransferase NEP1.
    
  0.646
Avbf_13424
5-hydroxytryptamine receptor.
    
  0.646
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.