STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_13469Pyridoxal-dependent decarboxylase domain-containing protein 1. (817 aa)    
Predicted Functional Partners:
Avbf_05810
Heat shock factor-binding protein 1.
      
 0.530
Avbf_12844
CUB domain-containing protein.
      
 0.530
Avbf_17874
Cytosolic Fe-S cluster assembly factor NUBP2.
      
 0.522
Avbf_02752
Uncharacterized protein.
      
 0.511
Avbf_00483
Putative deoxyribonuclease TATDN2.
      
 0.455
Ciao1
Probable cytosolic iron-sulfur protein assembly protein Ciao1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.
      
 0.441
Avbf_03744
Poly(A)-specific ribonuclease PARN-like domain-containing protein 1.
      
 0.439
Avbf_01715
UPF0428 protein CXorf56-like protein.
      
 0.432
Avbf_07021
Uncharacterized protein.
      
 0.430
Avbf_01938
OTU domain-containing protein 5-B.
      
 0.430
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
Server load: low (16%) [HD]