STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_09642Phenylalanine--tRNA ligase alpha subunit. (463 aa)    
Predicted Functional Partners:
Avbf_01017
Phenylalanine--tRNA ligase beta subunit.
  
 0.999
Avbf_10953
Leucine-rich repeat-containing protein 47.
  
 0.998
Avbf_00020
Putative phenylalanine--tRNA ligase, mitochondrial.
   
 
 0.965
Avbf_12753
Putative proline--tRNA ligase.
  
  
 0.909
Avbf_12754
Bifunctional glutamate/proline--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.909
Avbf_06391
Valine--tRNA ligase.
  
  
 0.853
Avbf_07176
Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.848
Avbf_05430
60S ribosomal protein L9.
   
 
 0.837
Avbf_11158
Tyrosine--tRNA ligase.
  
  
 0.833
Avbf_04691
DNA-directed RNA polymerase II subunit RPB3.
  
  
 0.830
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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