STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_10846Protein unc-80-like protein. (554 aa)    
Predicted Functional Partners:
Avbf_03510
Sodium leak channel non-selective protein.
   
 0.967
Avbf_03315
Uncharacterized protein.
   
 0.952
Avbf_03316
Protein unc-79-like protein.
   
 0.952
Avbf_03314
Uncharacterized protein.
   
 0.952
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.946
Avbf_16126
Uncharacterized protein.
 
     0.946
Avbf_05005
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.946
Avbf_06447
Uncharacterized protein.
    
 0.937
Avbf_08268
Retinoblastoma-binding protein 5-like protein.
    
 0.926
Avbf_06149
Histone-lysine N-methyltransferase SETD1.
   
 0.912
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.