Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_00431 | Avbf_05005 | A0A444TMV7 | A0A444T6M5 | cGMP-dependent protein kinase, isozyme 1; Belongs to the protein kinase superfamily. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.726 |
Avbf_00431 | Avbf_05028 | A0A444TMV7 | A0A444TIF6 | cGMP-dependent protein kinase, isozyme 1; Belongs to the protein kinase superfamily. | cAMP-dependent protein kinase regulatory subunit. | 0.733 |
Avbf_00431 | Avbf_05542 | A0A444TMV7 | A0A444SIU2 | cGMP-dependent protein kinase, isozyme 1; Belongs to the protein kinase superfamily. | Receptor-type guanylate cyclase Gyc76C. | 0.853 |
Avbf_00431 | Avbf_11365 | A0A444TMV7 | A0A444SDQ9 | cGMP-dependent protein kinase, isozyme 1; Belongs to the protein kinase superfamily. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.726 |
Avbf_01845 | Avbf_02319 | A0A444TDW9 | A0A444TLH6 | CAVP-target protein. | Guanine nucleotide-binding protein G(S) subunit alpha. | 0.989 |
Avbf_01845 | Avbf_05005 | A0A444TDW9 | A0A444T6M5 | CAVP-target protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.999 |
Avbf_01845 | Avbf_05542 | A0A444TDW9 | A0A444SIU2 | CAVP-target protein. | Receptor-type guanylate cyclase Gyc76C. | 0.909 |
Avbf_01845 | Avbf_11365 | A0A444TDW9 | A0A444SDQ9 | CAVP-target protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.999 |
Avbf_02319 | Avbf_01845 | A0A444TLH6 | A0A444TDW9 | Guanine nucleotide-binding protein G(S) subunit alpha. | CAVP-target protein. | 0.989 |
Avbf_02319 | Avbf_05005 | A0A444TLH6 | A0A444T6M5 | Guanine nucleotide-binding protein G(S) subunit alpha. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.771 |
Avbf_02319 | Avbf_05028 | A0A444TLH6 | A0A444TIF6 | Guanine nucleotide-binding protein G(S) subunit alpha. | cAMP-dependent protein kinase regulatory subunit. | 0.547 |
Avbf_02319 | Avbf_05542 | A0A444TLH6 | A0A444SIU2 | Guanine nucleotide-binding protein G(S) subunit alpha. | Receptor-type guanylate cyclase Gyc76C. | 0.926 |
Avbf_02319 | Avbf_11365 | A0A444TLH6 | A0A444SDQ9 | Guanine nucleotide-binding protein G(S) subunit alpha. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.771 |
Avbf_05005 | Avbf_00431 | A0A444T6M5 | A0A444TMV7 | Leucine-rich repeat serine/threonine-protein kinase 1. | cGMP-dependent protein kinase, isozyme 1; Belongs to the protein kinase superfamily. | 0.726 |
Avbf_05005 | Avbf_01845 | A0A444T6M5 | A0A444TDW9 | Leucine-rich repeat serine/threonine-protein kinase 1. | CAVP-target protein. | 0.999 |
Avbf_05005 | Avbf_02319 | A0A444T6M5 | A0A444TLH6 | Leucine-rich repeat serine/threonine-protein kinase 1. | Guanine nucleotide-binding protein G(S) subunit alpha. | 0.771 |
Avbf_05005 | Avbf_05028 | A0A444T6M5 | A0A444TIF6 | Leucine-rich repeat serine/threonine-protein kinase 1. | cAMP-dependent protein kinase regulatory subunit. | 0.727 |
Avbf_05005 | Avbf_05542 | A0A444T6M5 | A0A444SIU2 | Leucine-rich repeat serine/threonine-protein kinase 1. | Receptor-type guanylate cyclase Gyc76C. | 0.884 |
Avbf_05005 | Avbf_07938 | A0A444T6M5 | A0A444SSL1 | Leucine-rich repeat serine/threonine-protein kinase 1. | Neuropathy target esterase sws. | 0.726 |
Avbf_05005 | Avbf_07939 | A0A444T6M5 | A0A444SSK8 | Leucine-rich repeat serine/threonine-protein kinase 1. | PNPLA domain-containing protein. | 0.726 |
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