STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_13210Chitin-binding type-2 domain-containing protein. (290 aa)    
Predicted Functional Partners:
Avbf_00929
Cell division cycle 5-like protein.
   
 0.982
Avbf_08199
Small nuclear ribonucleoprotein Sm D2.
   
 
 0.980
Avbf_03725
U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1.
   
 0.975
Avbf_02913
Splicing factor U2af 38 kDa subunit.
   
 0.975
Avbf_16053
Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 
 0.972
Avbf_05787
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 
 0.972
Avbf_14967
Pre-mRNA-processing factor 19.
   
 0.968
Avbf_02144
Pre-mRNA-processing factor 19.
   
 0.968
Avbf_03545
Splicing factor 3B subunit 3.
   
 0.965
Avbf_07688
Small nuclear ribonucleoprotein G.
   
 
 0.963
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.