Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_00799 | Avbf_05182 | A0A444TKD8 | A0A444SW65 | Dynactin subunit 1. | Dynein heavy chain 5, axonemal. | 0.935 |
Avbf_00799 | Avbf_05183 | A0A444TKD8 | A0A444SW80 | Dynactin subunit 1. | Cytoplasmic dynein 2 heavy chain 1. | 0.935 |
Avbf_00799 | Avbf_08092 | A0A444TKD8 | A0A444T4V2 | Dynactin subunit 1. | Dynein heavy chain, cytoplasmic. | 0.935 |
Avbf_00799 | Avbf_11892 | A0A444TKD8 | A0A444SUZ9 | Dynactin subunit 1. | AAA_lid_1 domain-containing protein. | 0.935 |
Avbf_00799 | Avbf_11893 | A0A444TKD8 | A0A444SV05 | Dynactin subunit 1. | Dynein heavy chain 8, axonemal. | 0.858 |
Avbf_00799 | Avbf_11894 | A0A444TKD8 | A0A444SV07 | Dynactin subunit 1. | Uncharacterized protein. | 0.935 |
Avbf_00799 | Avbf_11895 | A0A444TKD8 | A0A444SUY8 | Dynactin subunit 1. | Dynein beta chain, ciliary. | 0.858 |
Avbf_00799 | Avbf_11896 | A0A444TKD8 | A0A444SUZ3 | Dynactin subunit 1. | Dynein gamma chain, flagellar outer arm. | 0.935 |
Avbf_00799 | Avbf_13710 | A0A444TKD8 | A0A444T5M8 | Dynactin subunit 1. | Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. | 0.966 |
Avbf_00799 | Avbf_15149 | A0A444TKD8 | A0A444SJF9 | Dynactin subunit 1. | Dynein heavy chain 5, axonemal. | 0.935 |
Avbf_05182 | Avbf_00799 | A0A444SW65 | A0A444TKD8 | Dynein heavy chain 5, axonemal. | Dynactin subunit 1. | 0.935 |
Avbf_05182 | Avbf_05183 | A0A444SW65 | A0A444SW80 | Dynein heavy chain 5, axonemal. | Cytoplasmic dynein 2 heavy chain 1. | 0.949 |
Avbf_05182 | Avbf_08092 | A0A444SW65 | A0A444T4V2 | Dynein heavy chain 5, axonemal. | Dynein heavy chain, cytoplasmic. | 0.926 |
Avbf_05182 | Avbf_11892 | A0A444SW65 | A0A444SUZ9 | Dynein heavy chain 5, axonemal. | AAA_lid_1 domain-containing protein. | 0.936 |
Avbf_05182 | Avbf_11893 | A0A444SW65 | A0A444SV05 | Dynein heavy chain 5, axonemal. | Dynein heavy chain 8, axonemal. | 0.942 |
Avbf_05182 | Avbf_11894 | A0A444SW65 | A0A444SV07 | Dynein heavy chain 5, axonemal. | Uncharacterized protein. | 0.947 |
Avbf_05182 | Avbf_11895 | A0A444SW65 | A0A444SUY8 | Dynein heavy chain 5, axonemal. | Dynein beta chain, ciliary. | 0.944 |
Avbf_05182 | Avbf_11896 | A0A444SW65 | A0A444SUZ3 | Dynein heavy chain 5, axonemal. | Dynein gamma chain, flagellar outer arm. | 0.947 |
Avbf_05182 | Avbf_13710 | A0A444SW65 | A0A444T5M8 | Dynein heavy chain 5, axonemal. | Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. | 0.932 |
Avbf_05182 | Avbf_15149 | A0A444SW65 | A0A444SJF9 | Dynein heavy chain 5, axonemal. | Dynein heavy chain 5, axonemal. | 0.935 |
page 1 of 6