STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_11640Uncharacterized protein. (473 aa)    
Predicted Functional Partners:
Avbf_02294
G protein-activated inward rectifier potassium channel 3.
    
 0.907
Avbf_03665
Inward rectifier potassium channel 4.
    
 0.907
Avbf_00045
Myosin light chain kinase, smooth muscle.
    
 0.751
Avbf_02557
Myosin light chain kinase, smooth muscle.
    
 0.751
Avbf_01580
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.737
Avbf_13981
Low molecular weight phosphotyrosine protein phosphatase.
   
 
 0.720
Avbf_03595
ATP-binding cassette sub-family B member 6, mitochondrial.
    
 0.696
Avbf_07122
Eukaryotic translation initiation factor 5B.
   
 
 0.689
Avbf_05579
28S ribosomal protein S29, mitochondrial.
    
   0.682
Avbf_02844
Ubiquitin carboxyl-terminal hydrolase 10; Belongs to the peptidase C19 family.
    
  0.675
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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