STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_13223Histone H2A; Belongs to the histone H2A family. (79 aa)    
Predicted Functional Partners:
Avbf_12168
Histone H2A deubiquitinase MYSM1.
    
 0.993
Avbf_11951
Histone H2A; Belongs to the histone H2A family.
  
0.951
Avbf_03217
Chromatin-remodeling complex ATPase chain Iswi.
    
 0.932
Avbf_11798
Ubiquitin-40S ribosomal protein S27a.
   
 0.930
Avbf_04691
DNA-directed RNA polymerase II subunit RPB3.
    
 0.927
Avbf_07274
Tumor suppressor p53-binding protein 1.
    
 0.926
Avbf_10867
Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3.
    
 0.924
Avbf_14372
Histone H2A; Belongs to the histone H2A family.
  
 0.921
Avbf_05236
Polycomb protein eed-B.
    
 0.921
Avbf_19091
Histone H2A; Belongs to the histone H2A family.
  
 0.921
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.