STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_10566Putative serine hydrolase. (1081 aa)    
Predicted Functional Partners:
Avbf_01580
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.957
Avbf_05071
ATP synthase subunit O, mitochondrial.
   
 0.806
Avbf_10343
Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial.
  
 
 0.801
Avbf_04506
Fumarylacetoacetase.
  
 
 0.798
Avbf_18654
Ubiquinone biosynthesis O-methyltransferase.
  
 
 0.785
Avbf_09883
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.785
Avbf_01671
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
    
 0.779
Avbf_00367
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
  
 
 0.767
Avbf_01268
Iodotyrosine deiodinase 1.
  
 
 0.767
Avbf_09701
ATP synthase subunit gamma.
   
 0.741
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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