Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_08471 | Avbf_10862 | A0A444TCK2 | A0A444T6L4 | NAD kinase. | High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.415 |
Avbf_08471 | Avbf_15978 | A0A444TCK2 | A0A444SL31 | NAD kinase. | High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.415 |
Avbf_08471 | Avbf_16290 | A0A444TCK2 | A0A444T3K1 | NAD kinase. | High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.415 |
Avbf_10631 | Avbf_10862 | A0A444TAQ0 | A0A444T6L4 | Choline transporter-like protein 2; Belongs to the CTL (choline transporter-like) family. | High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.540 |
Avbf_10631 | Avbf_11168 | A0A444TAQ0 | A0A444SV25 | Choline transporter-like protein 2; Belongs to the CTL (choline transporter-like) family. | Choline transporter-like protein 3; Belongs to the CTL (choline transporter-like) family. | 0.840 |
Avbf_10631 | Avbf_15978 | A0A444TAQ0 | A0A444SL31 | Choline transporter-like protein 2; Belongs to the CTL (choline transporter-like) family. | High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.540 |
Avbf_10631 | Avbf_16290 | A0A444TAQ0 | A0A444T3K1 | Choline transporter-like protein 2; Belongs to the CTL (choline transporter-like) family. | High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.540 |
Avbf_10862 | Avbf_08471 | A0A444T6L4 | A0A444TCK2 | High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | NAD kinase. | 0.415 |
Avbf_10862 | Avbf_10631 | A0A444T6L4 | A0A444TAQ0 | High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Choline transporter-like protein 2; Belongs to the CTL (choline transporter-like) family. | 0.540 |
Avbf_10862 | Avbf_11168 | A0A444T6L4 | A0A444SV25 | High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Choline transporter-like protein 3; Belongs to the CTL (choline transporter-like) family. | 0.540 |
Avbf_10862 | Avbf_11169 | A0A444T6L4 | A0A444SV40 | High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | CTL-like protein 1. | 0.540 |
Avbf_10862 | Avbf_15978 | A0A444T6L4 | A0A444SL31 | High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.944 |
Avbf_11168 | Avbf_10631 | A0A444SV25 | A0A444TAQ0 | Choline transporter-like protein 3; Belongs to the CTL (choline transporter-like) family. | Choline transporter-like protein 2; Belongs to the CTL (choline transporter-like) family. | 0.840 |
Avbf_11168 | Avbf_10862 | A0A444SV25 | A0A444T6L4 | Choline transporter-like protein 3; Belongs to the CTL (choline transporter-like) family. | High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.540 |
Avbf_11168 | Avbf_15978 | A0A444SV25 | A0A444SL31 | Choline transporter-like protein 3; Belongs to the CTL (choline transporter-like) family. | High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.540 |
Avbf_11168 | Avbf_16290 | A0A444SV25 | A0A444T3K1 | Choline transporter-like protein 3; Belongs to the CTL (choline transporter-like) family. | High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.540 |
Avbf_11169 | Avbf_10862 | A0A444SV40 | A0A444T6L4 | CTL-like protein 1. | High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.540 |
Avbf_11169 | Avbf_15978 | A0A444SV40 | A0A444SL31 | CTL-like protein 1. | High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.540 |
Avbf_11169 | Avbf_16290 | A0A444SV40 | A0A444T3K1 | CTL-like protein 1. | High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.540 |
Avbf_15978 | Avbf_08471 | A0A444SL31 | A0A444TCK2 | High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | NAD kinase. | 0.415 |
page 1 of 2