STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_15905NACHT domain-containing protein. (1489 aa)    
Predicted Functional Partners:
Avbf_07381
Axin-1.
    
 0.952
Avbf_17441
Unconventional myosin-XVIIIa.
    
 0.936
Avbf_09613
E3 ubiquitin-protein ligase.
    
 0.935
Avbf_05642
E3 ubiquitin-protein ligase.
    
 0.935
Avbf_04022
Regulator of G-protein signaling 10.
    
 0.930
Avbf_04024
Regulator of G-protein signaling loco.
    
 0.930
Avbf_04692
Spectrin alpha chain, non-erythrocytic 1.
   
 0.928
Avbf_04693
Spectrin beta chain, non-erythrocytic 5.
   
 0.928
Avbf_01753
Spectrin beta chain.
   
 0.928
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
  
 0.907
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.