STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_12136Peroxisome biogenesis factor 1. (1091 aa)    
Predicted Functional Partners:
Avbf_10850
Peroxisome assembly factor 2.
  
0.999
Avbf_13840
UBX domain-containing protein 2.
   
 0.985
Avbf_00194
Peroxisomal membrane protein PEX13.
    
 0.978
Avbf_08307
Peroxisomal targeting signal 1 receptor.
   
 0.977
Avbf_05783
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.974
Avbf_09233
RING-type domain-containing protein.
   
 0.968
Avbf_13175
Uncharacterized protein.
    
 0.960
Avbf_03968
Uncharacterized protein.
    
 0.960
Avbf_02215
Peroxisomal biogenesis factor 19.
    
 0.956
Avbf_09573
Nuclear protein localization protein 4-like protein.
    
 0.952
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.