STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_13217Histone H2A; Belongs to the histone H2A family. (130 aa)    
Predicted Functional Partners:
Avbf_01532
RNA polymerase-associated protein LEO1.
    
 0.933
Avbf_11951
Histone H2A; Belongs to the histone H2A family.
  
0.927
Avbf_00772
Core histone macro-H2A.1.
 
 
 0.912
Avbf_06270
RNA polymerase II-associated factor 1-like protein.
    
 0.904
Avbf_13876
Parafibromin.
    
 0.904
Avbf_04691
DNA-directed RNA polymerase II subunit RPB3.
    
 0.898
Avbf_03217
Chromatin-remodeling complex ATPase chain Iswi.
   
 0.898
Avbf_02564
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
  0.890
Avbf_07924
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
    
 0.890
Avbf_04034
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.884
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.