Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_00090 | Avbf_02234 | A0A444TRY8 | A0A444TE82 | Alanine--glyoxylate aminotransferase 2, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glycine dehydrogenase (Decarboxylating), mitochondrial. | 0.968 |
Avbf_00090 | Avbf_04558 | A0A444TRY8 | A0A444T457 | Alanine--glyoxylate aminotransferase 2, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Trifunctional purine biosynthetic protein adenosine-3. | 0.544 |
Avbf_00090 | Avbf_10919 | A0A444TRY8 | A0A444SJ29 | Alanine--glyoxylate aminotransferase 2, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Serine--pyruvate aminotransferase. | 0.981 |
Avbf_00090 | Avbf_13339 | A0A444TRY8 | A0A444SNB5 | Alanine--glyoxylate aminotransferase 2, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glyoxylate reductase/hydroxypyruvate reductase. | 0.922 |
Avbf_00090 | Avbf_16023 | A0A444TRY8 | A0A444T0M8 | Alanine--glyoxylate aminotransferase 2, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Serine--pyruvate aminotransferase, mitochondrial. | 0.893 |
Avbf_02234 | Avbf_00090 | A0A444TE82 | A0A444TRY8 | Glycine dehydrogenase (Decarboxylating), mitochondrial. | Alanine--glyoxylate aminotransferase 2, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.968 |
Avbf_02234 | Avbf_04558 | A0A444TE82 | A0A444T457 | Glycine dehydrogenase (Decarboxylating), mitochondrial. | Trifunctional purine biosynthetic protein adenosine-3. | 0.983 |
Avbf_02234 | Avbf_10919 | A0A444TE82 | A0A444SJ29 | Glycine dehydrogenase (Decarboxylating), mitochondrial. | Serine--pyruvate aminotransferase. | 0.962 |
Avbf_02234 | Avbf_11442 | A0A444TE82 | A0A444SJK0 | Glycine dehydrogenase (Decarboxylating), mitochondrial. | Uncharacterized protein. | 0.473 |
Avbf_02234 | Avbf_13339 | A0A444TE82 | A0A444SNB5 | Glycine dehydrogenase (Decarboxylating), mitochondrial. | Glyoxylate reductase/hydroxypyruvate reductase. | 0.836 |
Avbf_02234 | Avbf_16023 | A0A444TE82 | A0A444T0M8 | Glycine dehydrogenase (Decarboxylating), mitochondrial. | Serine--pyruvate aminotransferase, mitochondrial. | 0.787 |
Avbf_03908 | Avbf_04558 | A0A444TM01 | A0A444T457 | Enolase. | Trifunctional purine biosynthetic protein adenosine-3. | 0.734 |
Avbf_03908 | Avbf_10919 | A0A444TM01 | A0A444SJ29 | Enolase. | Serine--pyruvate aminotransferase. | 0.476 |
Avbf_03908 | Avbf_11442 | A0A444TM01 | A0A444SJK0 | Enolase. | Uncharacterized protein. | 0.601 |
Avbf_03908 | Avbf_13339 | A0A444TM01 | A0A444SNB5 | Enolase. | Glyoxylate reductase/hydroxypyruvate reductase. | 0.836 |
Avbf_03908 | Avbf_15915 | A0A444TM01 | A0A444SLA3 | Enolase. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.998 |
Avbf_03908 | Avbf_16023 | A0A444TM01 | A0A444T0M8 | Enolase. | Serine--pyruvate aminotransferase, mitochondrial. | 0.476 |
Avbf_04558 | Avbf_00090 | A0A444T457 | A0A444TRY8 | Trifunctional purine biosynthetic protein adenosine-3. | Alanine--glyoxylate aminotransferase 2, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.544 |
Avbf_04558 | Avbf_02234 | A0A444T457 | A0A444TE82 | Trifunctional purine biosynthetic protein adenosine-3. | Glycine dehydrogenase (Decarboxylating), mitochondrial. | 0.983 |
Avbf_04558 | Avbf_03908 | A0A444T457 | A0A444TM01 | Trifunctional purine biosynthetic protein adenosine-3. | Enolase. | 0.734 |
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