STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_07072Ubiquilin-1. (572 aa)    
Predicted Functional Partners:
Avbf_06023
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.997
Avbf_12168
Histone H2A deubiquitinase MYSM1.
   
 0.993
Avbf_13840
UBX domain-containing protein 2.
    
 0.993
Avbf_16365
Fanconi anemia group M protein.
   
 0.989
Avbf_08146
26S proteasome non-ATPase regulatory subunit 4.
   
 0.989
Avbf_14601
Uncharacterized protein.
   
 0.986
Avbf_05756
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.986
Avbf_09641
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.986
Avbf_17019
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.986
Avbf_05319
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.986
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.