STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_16586High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (213 aa)    
Predicted Functional Partners:
Avbf_16290
High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.936
Avbf_10862
High-affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.913
Avbf_11168
Choline transporter-like protein 3; Belongs to the CTL (choline transporter-like) family.
     
 0.540
Avbf_11169
CTL-like protein 1.
     
 0.540
Avbf_10631
Choline transporter-like protein 2; Belongs to the CTL (choline transporter-like) family.
     
 0.540
Avbf_08471
NAD kinase.
    
  0.415
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.