STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_12125Replication factor C subunit 1. (128 aa)    
Predicted Functional Partners:
Avbf_04829
Replication factor C subunit 4.
   
 0.996
Avbf_07748
Replication factor C subunit 3.
   
 0.995
Avbf_03180
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.989
Avbf_07747
Uncharacterized protein.
   
 0.987
Avbf_01923
Replication factor C subunit 5.
   
 0.985
Avbf_15681
Replication factor C subunit 5.
   
 0.985
Avbf_08361
Replication factor C subunit 2.
   
 0.984
Avbf_08362
Replication factor C subunit 2.
   
 0.984
Avbf_16365
Fanconi anemia group M protein.
   
 0.980
Avbf_07652
Cell cycle checkpoint protein RAD17.
   
 0.971
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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