STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_12454Glutamate receptor ionotropic, NMDA 2B. (76 aa)    
Predicted Functional Partners:
Avbf_07104
Glutamate [NMDA] receptor subunit 1.
   
0.987
Avbf_16323
Glutamate [NMDA] receptor subunit 1.
  
0.987
Avbf_17896
Peripheral plasma membrane protein CASK.
   
 0.965
Avbf_03924
Peripheral plasma membrane protein CASK.
   
 0.965
Avbf_07105
Uncharacterized protein.
   
 0.958
Avbf_16322
Uncharacterized protein.
   
 0.958
Avbf_01986
Calcium/calmodulin-dependent protein kinase type II alpha chain.
   
 0.948
Avbf_02373
Disks large 1 tumor suppressor protein; Belongs to the MAGUK family.
    
 0.938
Avbf_02372
Protein lap4.
    
 0.938
Avbf_00969
CARD domain-containing protein.
    
 0.907
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.