STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_08586Collagen alpha-1(II) chain. (714 aa)    
Predicted Functional Partners:
Avbf_13773
Integrin beta.
    
 0.923
Avbf_01097
Integrin beta; Belongs to the integrin beta chain family.
    
 0.923
Avbf_14268
Integrin beta; Belongs to the integrin beta chain family.
    
 0.923
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.921
Avbf_05005
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.921
Avbf_16973
Integrin alpha-PS5.
    
 0.914
Avbf_00045
Myosin light chain kinase, smooth muscle.
    
 0.880
Avbf_02557
Myosin light chain kinase, smooth muscle.
    
 0.880
Avbf_01845
CAVP-target protein.
    
 0.866
Avbf_13437
Tubulin beta-3 chain.
    
 0.838
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.