STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_10894Poly [ADP-ribose] polymerase. (160 aa)    
Predicted Functional Partners:
Avbf_16558
Poly(ADP-ribose) glycohydrolase.
  
 
 0.926
Avbf_01405
DNA repair protein complementing XP-C cells.
    
 0.922
Avbf_01583
Poly(ADP-ribose) glycohydrolase.
    
 0.910
Avbf_03180
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.887
Avbf_05999
Replication protein A 32 kDa subunit.
   
 0.869
Avbf_02650
Replication protein A 32 kDa subunit.
   
 0.869
Avbf_03538
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
    
 0.865
Avbf_03539
BRCT domain-containing protein.
    
 0.865
Avbf_15356
Caspase-1; Belongs to the peptidase C14A family.
    
 0.864
Avbf_05163
Caspase-1; Belongs to the peptidase C14A family.
    
 0.864
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.