STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_13216Uncharacterized protein. (1439 aa)    
Predicted Functional Partners:
Avbf_16365
Fanconi anemia group M protein.
    
 0.995
Avbf_05999
Replication protein A 32 kDa subunit.
    
 0.890
Avbf_02650
Replication protein A 32 kDa subunit.
    
 0.890
Avbf_08260
Protein lin-9-like protein.
    
 0.884
Avbf_00960
Crossover junction endonuclease MUS81.
    
  0.854
Avbf_16030
Replication protein A 70 kDa DNA-binding subunit.
    
 0.843
Avbf_11018
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.843
Avbf_05658
OB domain-containing protein.
    
 0.843
Avbf_06814
Centromere protein S.
    
 0.826
Avbf_06520
WSCD family member.
    
 0.826
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.