STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_13175Uncharacterized protein. (236 aa)    
Predicted Functional Partners:
Avbf_00194
Peroxisomal membrane protein PEX13.
   
 0.989
Avbf_02215
Peroxisomal biogenesis factor 19.
    
 0.988
Avbf_08307
Peroxisomal targeting signal 1 receptor.
   
 0.988
Avbf_12560
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.979
Avbf_10850
Peroxisome assembly factor 2.
    
 0.970
Avbf_00478
Peroxisome biogenesis factor 2.
    
 0.970
Avbf_01010
Peroxisomal membrane protein 11B.
    
 0.967
Avbf_05783
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.964
Avbf_09233
RING-type domain-containing protein.
    
 0.963
Avbf_12136
Peroxisome biogenesis factor 1.
    
 0.960
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.