STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_11262GTP-binding protein YPTC1. (92 aa)    
Predicted Functional Partners:
Avbf_11191
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.997
Avbf_10487
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.995
Avbf_09945
TBC1 domain family member 20.
    
 0.994
Avbf_03642
Trafficking protein particle complex subunit 8.
    
 0.992
Avbf_08590
Trafficking protein particle complex subunit 2.
    
 0.990
Avbf_02231
Trafficking protein particle complex subunit 6B.
    
 0.990
Avbf_06440
Trafficking protein particle complex subunit 5.
    
 0.990
Avbf_01609
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1.
    
 0.982
Avbf_06410
Ras-related protein RABE1a.
  
0.978
Avbf_13565
Ras-related protein Rab-8A.
   
 0.977
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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