Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_01609 | Avbf_11262 | A0A444TLR2 | A0A444SRT4 | Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1. | GTP-binding protein YPTC1. | 0.982 |
Avbf_02231 | Avbf_03642 | A0A444TGE7 | A0A444TBZ1 | Trafficking protein particle complex subunit 6B. | Trafficking protein particle complex subunit 8. | 0.998 |
Avbf_02231 | Avbf_06440 | A0A444TGE7 | A0A444TH59 | Trafficking protein particle complex subunit 6B. | Trafficking protein particle complex subunit 5. | 0.998 |
Avbf_02231 | Avbf_08590 | A0A444TGE7 | A0A444T2I8 | Trafficking protein particle complex subunit 6B. | Trafficking protein particle complex subunit 2. | 0.998 |
Avbf_02231 | Avbf_10487 | A0A444TGE7 | A0A444SC39 | Trafficking protein particle complex subunit 6B. | Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.998 |
Avbf_02231 | Avbf_11191 | A0A444TGE7 | A0A444SJL8 | Trafficking protein particle complex subunit 6B. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.754 |
Avbf_02231 | Avbf_11262 | A0A444TGE7 | A0A444SRT4 | Trafficking protein particle complex subunit 6B. | GTP-binding protein YPTC1. | 0.990 |
Avbf_03642 | Avbf_02231 | A0A444TBZ1 | A0A444TGE7 | Trafficking protein particle complex subunit 8. | Trafficking protein particle complex subunit 6B. | 0.998 |
Avbf_03642 | Avbf_06440 | A0A444TBZ1 | A0A444TH59 | Trafficking protein particle complex subunit 8. | Trafficking protein particle complex subunit 5. | 0.998 |
Avbf_03642 | Avbf_08590 | A0A444TBZ1 | A0A444T2I8 | Trafficking protein particle complex subunit 8. | Trafficking protein particle complex subunit 2. | 0.998 |
Avbf_03642 | Avbf_10487 | A0A444TBZ1 | A0A444SC39 | Trafficking protein particle complex subunit 8. | Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.998 |
Avbf_03642 | Avbf_11191 | A0A444TBZ1 | A0A444SJL8 | Trafficking protein particle complex subunit 8. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.726 |
Avbf_03642 | Avbf_11262 | A0A444TBZ1 | A0A444SRT4 | Trafficking protein particle complex subunit 8. | GTP-binding protein YPTC1. | 0.992 |
Avbf_06410 | Avbf_11191 | A0A444T3D3 | A0A444SJL8 | Ras-related protein RABE1a. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.986 |
Avbf_06410 | Avbf_11262 | A0A444T3D3 | A0A444SRT4 | Ras-related protein RABE1a. | GTP-binding protein YPTC1. | 0.978 |
Avbf_06440 | Avbf_02231 | A0A444TH59 | A0A444TGE7 | Trafficking protein particle complex subunit 5. | Trafficking protein particle complex subunit 6B. | 0.998 |
Avbf_06440 | Avbf_03642 | A0A444TH59 | A0A444TBZ1 | Trafficking protein particle complex subunit 5. | Trafficking protein particle complex subunit 8. | 0.998 |
Avbf_06440 | Avbf_08590 | A0A444TH59 | A0A444T2I8 | Trafficking protein particle complex subunit 5. | Trafficking protein particle complex subunit 2. | 0.998 |
Avbf_06440 | Avbf_10487 | A0A444TH59 | A0A444SC39 | Trafficking protein particle complex subunit 5. | Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | 0.999 |
Avbf_06440 | Avbf_11191 | A0A444TH59 | A0A444SJL8 | Trafficking protein particle complex subunit 5. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.721 |
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