Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_16226Partitioning defective protein 6. (278 aa)    
Predicted Functional Partners:
Avbf_15756
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.998
Avbf_07454
Protein crumbs.
    
 0.995
Avbf_01079
MAGUK p55 subfamily member 5-A; Belongs to the MAGUK family.
   
 0.993
Avbf_08332
Lethal(2) giant larvae protein-like 2.
    
 
 0.981
Avbf_13337
MAGUK p55 subfamily member 7.
   
 0.981
Avbf_03668
Segment polarity protein dishevelled-like protein DVL-3.
    
 0.972
Avbf_08171
Ras-related C3 botulinum toxin substrate 1.
    
 0.971
Avbf_06827
Ras-related protein ced-10.
    
 0.971
Avbf_10467
Cdc42-like protein.
    
 0.971
Avbf_02343
Ras-related protein Rac1.
    
 0.971
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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