STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_18054Carnitine O-palmitoyltransferase 1, muscle isoform. (521 aa)    
Predicted Functional Partners:
Avbf_07524
Long-chain-fatty-acid--CoA ligase 4.
   
 
 0.955
Avbf_07388
Long-chain-fatty-acid--CoA ligase 1.
     
 0.952
Avbf_18082
Carn_acyltransf domain-containing protein.
  
 
 0.944
Avbf_18083
Carnitine O-palmitoyltransferase 2, mitochondrial; Belongs to the carnitine/choline acetyltransferase family.
  
 
0.930
Avbf_06367
Carnitine O-palmitoyltransferase 2, mitochondrial.
   
 
 0.915
Avbf_06222
Acetyl-CoA carboxylase.
     
 0.877
Avbf_07535
Protein Mdm4.
     
 0.699
Avbf_12992
Long chain acyl-CoA synthetase 8.
   
 
 0.685
Avbf_14274
Long-chain-fatty-acid--CoA ligase 4.
   
 
 0.685
Avbf_05043
Ethanolamine-phosphate cytidylyltransferase.
     
 0.553
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.