Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_01845 | Avbf_03391 | A0A444TDW9 | A0A444TIC5 | CAVP-target protein. | E3 ubiquitin-protein ligase MIB2. | 0.829 |
Avbf_01845 | Avbf_04022 | A0A444TDW9 | A0A444TKV1 | CAVP-target protein. | Regulator of G-protein signaling 10. | 0.501 |
Avbf_01845 | Avbf_04024 | A0A444TDW9 | A0A444TKV9 | CAVP-target protein. | Regulator of G-protein signaling loco. | 0.501 |
Avbf_01845 | Avbf_05005 | A0A444TDW9 | A0A444T6M5 | CAVP-target protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.999 |
Avbf_01845 | Avbf_06855 | A0A444TDW9 | A0A444ST31 | CAVP-target protein. | Interleukin-1 receptor-associated kinase 4; Belongs to the protein kinase superfamily. | 0.981 |
Avbf_01845 | Avbf_10682 | A0A444TDW9 | A0A444SUX6 | CAVP-target protein. | Mitogen-activated protein kinase 14B. | 0.912 |
Avbf_01845 | Avbf_11365 | A0A444TDW9 | A0A444SDQ9 | CAVP-target protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.999 |
Avbf_03391 | Avbf_01845 | A0A444TIC5 | A0A444TDW9 | E3 ubiquitin-protein ligase MIB2. | CAVP-target protein. | 0.829 |
Avbf_03391 | Avbf_04022 | A0A444TIC5 | A0A444TKV1 | E3 ubiquitin-protein ligase MIB2. | Regulator of G-protein signaling 10. | 0.947 |
Avbf_03391 | Avbf_04024 | A0A444TIC5 | A0A444TKV9 | E3 ubiquitin-protein ligase MIB2. | Regulator of G-protein signaling loco. | 0.947 |
Avbf_03391 | Avbf_05005 | A0A444TIC5 | A0A444T6M5 | E3 ubiquitin-protein ligase MIB2. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.996 |
Avbf_03391 | Avbf_06855 | A0A444TIC5 | A0A444ST31 | E3 ubiquitin-protein ligase MIB2. | Interleukin-1 receptor-associated kinase 4; Belongs to the protein kinase superfamily. | 0.940 |
Avbf_03391 | Avbf_10682 | A0A444TIC5 | A0A444SUX6 | E3 ubiquitin-protein ligase MIB2. | Mitogen-activated protein kinase 14B. | 0.845 |
Avbf_03391 | Avbf_11265 | A0A444TIC5 | A0A444T0C8 | E3 ubiquitin-protein ligase MIB2. | Myeloid differentiation primary response protein MyD88. | 0.707 |
Avbf_03391 | Avbf_11365 | A0A444TIC5 | A0A444SDQ9 | E3 ubiquitin-protein ligase MIB2. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.996 |
Avbf_03391 | Avbf_18874 | A0A444TIC5 | A0A444SFZ4 | E3 ubiquitin-protein ligase MIB2. | TNF receptor-associated factor 3. | 0.955 |
Avbf_04022 | Avbf_01845 | A0A444TKV1 | A0A444TDW9 | Regulator of G-protein signaling 10. | CAVP-target protein. | 0.501 |
Avbf_04022 | Avbf_03391 | A0A444TKV1 | A0A444TIC5 | Regulator of G-protein signaling 10. | E3 ubiquitin-protein ligase MIB2. | 0.947 |
Avbf_04022 | Avbf_05005 | A0A444TKV1 | A0A444T6M5 | Regulator of G-protein signaling 10. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.999 |
Avbf_04022 | Avbf_06855 | A0A444TKV1 | A0A444ST31 | Regulator of G-protein signaling 10. | Interleukin-1 receptor-associated kinase 4; Belongs to the protein kinase superfamily. | 0.942 |
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