STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_01522Torsin-1B. (284 aa)    
Predicted Functional Partners:
Avbf_16140
Torsin-1A-interacting protein 1.
    
 
 0.864
Avbf_10787
Torsin-1A-interacting protein 1.
    
 
 0.864
Avbf_08114
COP9 signalosome complex subunit 4.
   
 0.751
Avbf_11617
COP9 signalosome complex subunit 2.
   
 
  0.721
Avbf_08474
COP9 signalosome complex subunit 5.
     
 0.721
Avbf_00216
COP9 signalosome complex subunit 8.
   
 
  0.703
Avbf_13537
COP9 signalosome complex subunit 6.
   
 
  0.699
Avbf_03581
Uncharacterized protein.
 
    
 0.540
Avbf_04178
Phosphatidate phosphatase LPIN2.
    
 
 0.502
Avbf_05267
Beta-1,4-galactosyltransferase 7.
 
      0.493
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.