STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_12158Charged multivesicular body protein 4b. (117 aa)    
Predicted Functional Partners:
Avbf_01791
Tyrosine-protein phosphatase non-receptor type 23.
    
 0.992
Avbf_03971
Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family.
    
 0.988
Avbf_04159
Charged multivesicular body protein 2a.
    
 0.988
Avbf_04184
Charged multivesicular body protein 5.
   
 0.988
Avbf_07391
Charged multivesicular body protein 6.
    
 0.987
Avbf_18768
Programmed cell death 6-interacting protein.
    
 0.983
Avbf_03408
Programmed cell death 6-interacting protein.
    
 0.983
Avbf_01946
Vacuolar protein sorting-associated protein 4A.
    
 0.971
Avbf_05819
Coiled-coil and C2 domain-containing protein 1-like.
    
 0.965
Avbf_06890
Vacuolar protein-sorting-associated protein 25.
    
 0.963
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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