STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_07487RNA-binding protein 1. (81 aa)    
Predicted Functional Partners:
Avbf_13140
Serine/arginine-rich splicing factor 1.
   
 0.998
Avbf_04448
Serine/arginine-rich splicing factor 2.
   
0.998
Avbf_12902
Transformer-2 protein-like beta.
   
 0.997
Avbf_04605
Transformer-2 protein-like beta.
   
 0.997
Avbf_16101
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.996
Avbf_04140
Eukaryotic initiation factor 4A-III.
   
 0.995
Avbf_02265
Serine/arginine-rich splicing factor 7.
   
0.991
Avbf_02266
Serine/arginine-rich splicing factor 3.
   
0.989
Avbf_06630
Protein mago nashi-like protein 2.
   
 0.986
Avbf_13629
Serine/arginine-rich splicing factor 4.
   
 0.979
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.