Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_00538 | Avbf_02599 | A0A444TF13 | A0A444TLL5 | Pumilio-like protein 2. | Heat shock protein 75 kDa, mitochondrial. | 0.489 |
Avbf_00538 | Avbf_02844 | A0A444TF13 | A0A444TR67 | Pumilio-like protein 2. | Ubiquitin carboxyl-terminal hydrolase 10; Belongs to the peptidase C19 family. | 0.746 |
Avbf_00538 | Avbf_05313 | A0A444TF13 | A0A444T0W8 | Pumilio-like protein 2. | Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.510 |
Avbf_00538 | Avbf_11394 | A0A444TF13 | A0A444SUN8 | Pumilio-like protein 2. | Clustered mitochondria protein-like. | 0.808 |
Avbf_00538 | Avbf_13930 | A0A444TF13 | A0A444SPB9 | Pumilio-like protein 2. | Ras GTPase-activating protein-binding protein 2. | 0.870 |
Avbf_02599 | Avbf_00538 | A0A444TLL5 | A0A444TF13 | Heat shock protein 75 kDa, mitochondrial. | Pumilio-like protein 2. | 0.489 |
Avbf_02599 | Avbf_11394 | A0A444TLL5 | A0A444SUN8 | Heat shock protein 75 kDa, mitochondrial. | Clustered mitochondria protein-like. | 0.828 |
Avbf_02844 | Avbf_00538 | A0A444TR67 | A0A444TF13 | Ubiquitin carboxyl-terminal hydrolase 10; Belongs to the peptidase C19 family. | Pumilio-like protein 2. | 0.746 |
Avbf_02844 | Avbf_11394 | A0A444TR67 | A0A444SUN8 | Ubiquitin carboxyl-terminal hydrolase 10; Belongs to the peptidase C19 family. | Clustered mitochondria protein-like. | 0.788 |
Avbf_02844 | Avbf_13930 | A0A444TR67 | A0A444SPB9 | Ubiquitin carboxyl-terminal hydrolase 10; Belongs to the peptidase C19 family. | Ras GTPase-activating protein-binding protein 2. | 0.993 |
Avbf_04983 | Avbf_09826 | A0A444SKJ0 | A0A444T1U0 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.962 |
Avbf_04983 | Avbf_11394 | A0A444SKJ0 | A0A444SUN8 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Clustered mitochondria protein-like. | 0.696 |
Avbf_04983 | Avbf_12330 | A0A444SKJ0 | A0A444T1K5 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Dihydrolipoyllysine-residue succinyltransferase. | 0.989 |
Avbf_05313 | Avbf_00538 | A0A444T0W8 | A0A444TF13 | Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | Pumilio-like protein 2. | 0.510 |
Avbf_05313 | Avbf_07864 | A0A444T0W8 | A0A444TDN3 | Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | mRNA-capping enzyme. | 0.800 |
Avbf_05313 | Avbf_11394 | A0A444T0W8 | A0A444SUN8 | Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | Clustered mitochondria protein-like. | 0.745 |
Avbf_07864 | Avbf_05313 | A0A444TDN3 | A0A444T0W8 | mRNA-capping enzyme. | Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.800 |
Avbf_07864 | Avbf_11394 | A0A444TDN3 | A0A444SUN8 | mRNA-capping enzyme. | Clustered mitochondria protein-like. | 0.700 |
Avbf_09826 | Avbf_04983 | A0A444T1U0 | A0A444SKJ0 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.962 |
Avbf_09826 | Avbf_11394 | A0A444T1U0 | A0A444SUN8 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Clustered mitochondria protein-like. | 0.696 |
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