STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_07812General transcription factor IIH subunit 2. (366 aa)    
Predicted Functional Partners:
Avbf_01361
General transcription factor IIH subunit 3.
   
 0.999
Avbf_12972
General transcription factor IIH subunit 1.
    
 0.999
Avbf_07460
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
 0.999
Avbf_09980
TFIIH basal transcription factor complex helicase XPD subunit.
    
 0.998
Avbf_02178
DNA excision repair protein haywire.
    
 0.998
Avbf_10004
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
   
 0.996
Avbf_08301
General transcription factor IIE subunit 1.
   
 0.996
Avbf_06734
Cyclin-H; Belongs to the cyclin family.
   
 0.995
Avbf_04231
Cyclin-dependent kinase 7.
   
 0.994
Avbf_09808
Transcription initiation factor IIB.
    
 0.993
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.