STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_17874Cytosolic Fe-S cluster assembly factor NUBP2. (119 aa)    
Predicted Functional Partners:
Avbf_02534
MMS19 nucleotide excision repair protein-like.
    
 0.998
Avbf_02600
Mitotic spindle-associated MMXD complex subunit MIP18.
   
 0.998
Avbf_11242
Cytosolic Fe-S cluster assembly factor narfl; Belongs to the NARF family.
   
 0.995
Avbf_09980
TFIIH basal transcription factor complex helicase XPD subunit.
    
 0.968
Avbf_03532
DNA polymerase.
    
 0.965
Avbf_05828
DNA polymerase alpha catalytic subunit.
    
 0.935
Avbf_04721
DNA polymerase zeta catalytic subunit.
    
 0.935
Avbf_04720
Uncharacterized protein.
    
 0.935
Avbf_19011
Fanconi anemia group J protein-like.
    
 0.905
Avbf_17117
Fanconi anemia group J protein-like.
    
 0.905
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.