STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_02894Myotubularin-related protein 4. (1068 aa)    
Predicted Functional Partners:
Avbf_14199
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta; Belongs to the PI3/PI4-kinase family.
    
 0.985
Avbf_08266
Polyphosphoinositide phosphatase.
     
 0.954
Avbf_09566
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
 
   
 0.954
Avbf_11550
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.950
Avbf_01802
Myotubularin-related protein 5.
    
0.949
Avbf_01441
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
     
 0.944
Avbf_12312
Myotubularin-related protein 2.
  
 
 
0.940
Avbf_01359
Phosphoinositide phospholipase C.
     
 0.931
Avbf_06567
Phosphatidylinositol 3-kinase VPS34; Belongs to the PI3/PI4-kinase family.
     
 0.924
Avbf_06568
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.924
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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