Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_01305 | Avbf_02542 | A0A444TIG5 | A0A444T4A2 | WD repeat-containing protein 46. | DDB1-and CUL4-associated factor 13. | 0.999 |
Avbf_01305 | Avbf_03478 | A0A444TIG5 | A0A444TPF0 | WD repeat-containing protein 46. | U3 small nucleolar RNA-associated protein 14-like protein C. | 0.999 |
Avbf_01305 | Avbf_04102 | A0A444TIG5 | A0A444SK82 | WD repeat-containing protein 46. | U3 small nucleolar RNA-interacting protein 2. | 0.999 |
Avbf_01305 | Avbf_06441 | A0A444TIG5 | A0A444SHJ2 | WD repeat-containing protein 46. | RNA 3'-terminal phosphate cyclase-like protein. | 0.998 |
Avbf_01305 | Avbf_10076 | A0A444TIG5 | A0A444SLD9 | WD repeat-containing protein 46. | Neuroguidin. | 0.999 |
Avbf_01305 | Avbf_10227 | A0A444TIG5 | A0A444STN8 | WD repeat-containing protein 46. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
Avbf_01305 | Avbf_11392 | A0A444TIG5 | A0A444STW1 | WD repeat-containing protein 46. | Ribosomal RNA small subunit methyltransferase NEP1. | 0.998 |
Avbf_01305 | Avbf_13424 | A0A444TIG5 | A0A444SY16 | WD repeat-containing protein 46. | 5-hydroxytryptamine receptor. | 0.998 |
Avbf_01305 | Avbf_14054 | A0A444TIG5 | A0A444SGG7 | WD repeat-containing protein 46. | Uncharacterized protein. | 0.999 |
Avbf_01305 | Avbf_17376 | A0A444TIG5 | A0A444SGJ1 | WD repeat-containing protein 46. | U3 small nucleolar ribonucleoprotein IMP3. | 0.998 |
Avbf_02542 | Avbf_01305 | A0A444T4A2 | A0A444TIG5 | DDB1-and CUL4-associated factor 13. | WD repeat-containing protein 46. | 0.999 |
Avbf_02542 | Avbf_03478 | A0A444T4A2 | A0A444TPF0 | DDB1-and CUL4-associated factor 13. | U3 small nucleolar RNA-associated protein 14-like protein C. | 0.999 |
Avbf_02542 | Avbf_04102 | A0A444T4A2 | A0A444SK82 | DDB1-and CUL4-associated factor 13. | U3 small nucleolar RNA-interacting protein 2. | 0.996 |
Avbf_02542 | Avbf_06441 | A0A444T4A2 | A0A444SHJ2 | DDB1-and CUL4-associated factor 13. | RNA 3'-terminal phosphate cyclase-like protein. | 0.994 |
Avbf_02542 | Avbf_10076 | A0A444T4A2 | A0A444SLD9 | DDB1-and CUL4-associated factor 13. | Neuroguidin. | 0.999 |
Avbf_02542 | Avbf_10227 | A0A444T4A2 | A0A444STN8 | DDB1-and CUL4-associated factor 13. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
Avbf_02542 | Avbf_11392 | A0A444T4A2 | A0A444STW1 | DDB1-and CUL4-associated factor 13. | Ribosomal RNA small subunit methyltransferase NEP1. | 0.998 |
Avbf_02542 | Avbf_13424 | A0A444T4A2 | A0A444SY16 | DDB1-and CUL4-associated factor 13. | 5-hydroxytryptamine receptor. | 0.998 |
Avbf_02542 | Avbf_14054 | A0A444T4A2 | A0A444SGG7 | DDB1-and CUL4-associated factor 13. | Uncharacterized protein. | 0.998 |
Avbf_02542 | Avbf_17376 | A0A444T4A2 | A0A444SGJ1 | DDB1-and CUL4-associated factor 13. | U3 small nucleolar ribonucleoprotein IMP3. | 0.997 |
page 1 of 6