STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_07278Nuclear factor NF-kappa-B subunit. (284 aa)    
Predicted Functional Partners:
Avbf_00762
Embryonic polarity protein dorsal.
  
0.989
Avbf_01592
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
    
 0.979
Avbf_02737
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.940
Avbf_06427
Cullin-1; Belongs to the cullin family.
    
 0.937
Avbf_17441
Unconventional myosin-XVIIIa.
    
 0.935
Avbf_09182
SUMO-conjugating enzyme UBC9-B; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.933
Avbf_11798
Ubiquitin-40S ribosomal protein S27a.
    
  0.929
Avbf_04022
Regulator of G-protein signaling 10.
    
 0.927
Avbf_04024
Regulator of G-protein signaling loco.
    
 0.927
Avbf_11567
F-box/WD repeat-containing protein 1A.
    
 0.918
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.