STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_17009Centromere protein S. (108 aa)    
Predicted Functional Partners:
Avbf_16365
Fanconi anemia group M protein.
   
 0.999
Avbf_02411
Fanconi anemia core complex-associated protein 24.
    
 0.973
Avbf_04307
Centromere protein I.
   
 0.958
Avbf_09573
Nuclear protein localization protein 4-like protein.
    
 0.952
Avbf_07743
Uncharacterized protein.
   
 0.947
Avbf_05643
60S ribosomal protein L10a.
    
 0.944
Avbf_09328
Nuclear transport factor 2.
    
 0.940
Avbf_02545
Fanconi anemia group A protein-like.
    
 0.940
Avbf_00960
Crossover junction endonuclease MUS81.
   
 0.936
Avbf_16030
Replication protein A 70 kDa DNA-binding subunit.
    
  0.928
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.